STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CELSR1Cadherin EGF LAG seven-pass G-type receptor 1. (930 aa)    
Predicted Functional Partners:
UY3_11473
Cadherin EGF LAG seven-pass G-type receptor 1.
 
     0.935
UY3_17059
Cadherin EGF LAG seven-pass G-type receptor 2.
 
      0.899
FAT1
Protocadherin Fat 1.
 
 
 0.733
UY3_09154
Latrophilin-1; Belongs to the G-protein coupled receptor 2 family.
 
 
  
 0.651
DVL1
Segment polarity protein dishevelled like protein DVL-1.
     
 0.557
LPHN3
Latrophilin-3.
   
  
 0.530
PRICKLE1
Prickle-like protein 1.
   
 0.526
PTK7
Inactive tyrosine-protein kinase 7.
   
 
 0.462
HOPX
Homeodomain-only protein.
      
 0.420
ADGRB1
Brain-specific angiogenesis inhibitor 1.
      
 0.406
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.