STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_11445Ankyrin repeat domain-containing protein 31. (1388 aa)    
Predicted Functional Partners:
UY3_02272
Breast cancer type 1 susceptibility protein like protein.
   
 0.858
UY3_04406
DNA endonuclease RBBP8.
    
 0.795
UY3_11290
DNA topoisomerase 2-binding protein 1-A.
    
 0.736
NBN
Nibrin.
    
 0.718
RAD50
DNA repair protein RAD50.
    
 0.646
UY3_12831
Breast cancer type 2 susceptibility protein.
    
 0.634
UBB
Polyubiquitin-C.
   
  0.606
BRCC3
Lys-63-specific deubiquitinase BRCC36.
    
 0.585
UY3_18438
BRCA1-A complex subunit BRE.
   
 0.559
UY3_09614
Regulator of telomere elongation helicase 1.
    
 0.550
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.