STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUPL2Nucleoporin-like protein 2. (414 aa)    
Predicted Functional Partners:
GLE1
Nucleoporin GLE1.
    
 0.949
XPO1
Exportin-1.
     
 0.923
UY3_08247
Nup214_FG domain-containing protein.
    
 0.818
UY3_01666
Nuclear pore complex protein Nup88.
     
 0.801
UY3_07032
mRNA export factor.
    
 0.787
NUP50
Nuclear pore complex protein Nup50.
     
 0.748
NUP35
Nucleoporin NUP53.
    
 0.733
NUP93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
     
 0.724
UY3_08273
Uncharacterized protein.
     
 0.723
SEH1L
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
    
 0.720
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.