STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RDH10Retinol dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (342 aa)    
Predicted Functional Partners:
ALDH1A2
Retinal dehydrogenase 2; Belongs to the aldehyde dehydrogenase family.
  
 0.962
ALDH1A3
Aldehyde dehydrogenase family 1 member A3; Belongs to the aldehyde dehydrogenase family.
  
 0.950
RDH16
Retinol dehydrogenase 16; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
0.933
ADH5
Alcohol dehydrogenase class-3.
   
 
 0.932
RPE65
Retinoid isomerohydrolase.
   
 
 0.930
BCO1
Beta,beta-carotene 15,15'-monooxygenase.
   
 
 0.927
UY3_10075
Alcohol dehydrogenase 1.
   
 
 0.926
UY3_16231
Cytochrome P450 27C1; Belongs to the cytochrome P450 family.
   
 
 0.918
RETSAT
Putative all-trans-retinol 13,14-reductase.
    
 0.911
PNPLA4
Patatin-like phospholipase domain-containing protein 4.
     
 0.904
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.