STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_10533Serine/threonine-protein kinase SRPK1. (1249 aa)    
Predicted Functional Partners:
U2AF2
Splicing factor U2AF 65 kDa subunit.
    
 
 0.727
CDC5L
Cell division cycle 5-like protein.
    
   0.645
UY3_11808
Serine/arginine-rich splicing factor 4.
    
 
 0.500
ZNF318
C2H2-type domain-containing protein.
    
 
 0.500
SRSF6
Serine/arginine-rich splicing factor 6.
    
 
 0.500
UY3_01761
Serine/arginine-rich splicing factor 5.
    
 
 0.500
UY3_01746
Serine/arginine-rich splicing factor 5.
    
 
 0.500
UY3_01759
Serine/arginine-rich splicing factor 4.
    
 
 0.500
SNRNP35
U11/U12 small nuclear ribonucleoprotein 35 kDa protein.
    
 
 0.455
UY3_02211
U1 small nuclear ribonucleoprotein 70 kDa.
    
 
 0.455
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.