STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_12106Krueppel-like factor 12. (235 aa)    
Predicted Functional Partners:
KLF6
Krueppel-like factor 6.
 
 
 
 0.903
UY3_08686
Krueppel-like factor 4.
 
      0.900
KLF2
Krueppel-like factor 2.
 
      0.833
UY3_10929
Krueppel-like factor 5.
 
    
 0.815
KLF5
Krueppel-like factor 5.
 
   
 0.792
UY3_06077
Krueppel-like factor 12.
 
      0.650
UY3_03786
Mitogen-activated protein kinase 6.
  
 
  0.505
SOX6
Transcription factor SOX-6.
  
 
 
 0.456
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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