STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPV6Transient receptor potential cation channel subfamily V member 6. (682 aa)    
Predicted Functional Partners:
Calmodulin
Calmodulin; Belongs to the calmodulin family.
    
 
 0.482
UY3_19066
Calmodulin; Belongs to the calmodulin family.
    
 
 0.482
UY3_03375
Calmodulin, striated muscle; Belongs to the calmodulin family.
    
 
 0.482
UY3_03374
Calmodulin, striated muscle; Belongs to the calmodulin family.
    
 
 0.482
UY3_02901
Calmodulin; Belongs to the calmodulin family.
    
 
 0.482
TRPC3
Short transient receptor potential channel 3; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.439
LYPD6
Ly6/PLAUR domain-containing protein 6.
      
 0.438
TRPA1
Transient receptor potential cation channel subfamily A member 1.
     
0.434
TRPM2
Transient receptor potential cation channel subfamily M member 2.
     
 0.418
TRPC6
Short transient receptor potential channel 6; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.416
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.