STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NABP2SOSS complex subunit B1. (143 aa)    
Predicted Functional Partners:
UY3_14681
Guanylate cyclase.
    
 0.875
INTS1
Integrator complex subunit 1.
    
  0.836
INTS5
Integrator complex subunit 5.
    
  0.835
UY3_14883
Integrator complex subunit 6.
    
 0.726
UY3_09386
SOSS complex subunit C.
    
 
 0.716
UY3_06248
Zinc finger CCCH domain-containing protein 6.
     
 0.641
INTS11
Integrator complex subunit 11.
   
 0.619
TMEM240
Transmembrane protein C1orf70.
   
 
  0.616
UY3_05349
Integrator complex subunit 7.
     
 0.597
INTS12
Integrator complex subunit 12.
   
 
  0.597
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.