Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CD22 | CD4 | M7B9A5 | M7B2Z9 | B-cell receptor CD22. | T-cell surface glycoprotein CD4. | 0.487 |
CD22 | CTSA | M7B9A5 | M7B807 | B-cell receptor CD22. | Carboxypeptidase; Belongs to the peptidase S10 family. | 0.406 |
CD22 | SIAE | M7B9A5 | M7BN53 | B-cell receptor CD22. | Sialate O-acetylesterase. | 0.527 |
CD22 | SIGLEC15 | M7B9A5 | M7C6K1 | B-cell receptor CD22. | Sialic acid-binding Ig-like lectin 15. | 0.499 |
CD22 | UY3_19123 | M7B9A5 | M7B6F0 | B-cell receptor CD22. | Sialoadhesin. | 0.624 |
CD4 | CD22 | M7B2Z9 | M7B9A5 | T-cell surface glycoprotein CD4. | B-cell receptor CD22. | 0.487 |
CD4 | UY3_19123 | M7B2Z9 | M7B6F0 | T-cell surface glycoprotein CD4. | Sialoadhesin. | 0.447 |
CTSA | CD22 | M7B807 | M7B9A5 | Carboxypeptidase; Belongs to the peptidase S10 family. | B-cell receptor CD22. | 0.406 |
CTSA | SIAE | M7B807 | M7BN53 | Carboxypeptidase; Belongs to the peptidase S10 family. | Sialate O-acetylesterase. | 0.560 |
CTSA | SIGLEC15 | M7B807 | M7C6K1 | Carboxypeptidase; Belongs to the peptidase S10 family. | Sialic acid-binding Ig-like lectin 15. | 0.410 |
CTSA | UY3_19123 | M7B807 | M7B6F0 | Carboxypeptidase; Belongs to the peptidase S10 family. | Sialoadhesin. | 0.407 |
Galectin-4 | HS6ST1 | M7BHY3 | M7CMW9 | Galectin. | Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. | 0.404 |
Galectin-4 | NDST3 | M7BHY3 | M7BYC4 | Galectin. | Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3. | 0.400 |
Galectin-4 | POFUT1 | M7BHY3 | M7B7X0 | Galectin. | GDP-fucose protein O-fucosyltransferase 1. | 0.417 |
Galectin-4 | UY3_19123 | M7BHY3 | M7B6F0 | Galectin. | Sialoadhesin. | 0.427 |
HS6ST1 | Galectin-4 | M7CMW9 | M7BHY3 | Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. | Galectin. | 0.404 |
HS6ST1 | NDST3 | M7CMW9 | M7BYC4 | Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. | Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3. | 0.481 |
HS6ST1 | POFUT1 | M7CMW9 | M7B7X0 | Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. | GDP-fucose protein O-fucosyltransferase 1. | 0.421 |
HS6ST1 | UY3_19123 | M7CMW9 | M7B6F0 | Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. | Sialoadhesin. | 0.400 |
NDST3 | Galectin-4 | M7BYC4 | M7BHY3 | Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3. | Galectin. | 0.400 |
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