STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNNI2Troponin I, fast skeletal muscle. (294 aa)    
Predicted Functional Partners:
UY3_01815
Troponin T, cardiac muscle isoforms.
 
 0.977
SMIM20
Uncharacterized protein.
   
 0.929
UY3_18527
Myosin light chain 1, skeletal muscle isoform.
   
 0.924
UY3_10026
Troponin T, fast skeletal muscle isoforms.
 
 
 0.875
MYLPF
Myosin regulatory light chain 2, skeletal muscle isoform.
   
 0.847
UY3_08106
Parkinson disease 7 domain-containing protein 1.
   
 0.813
UY3_06739
Myosin light chain 1, cardiac muscle.
   
 0.809
TNNI1
Troponin I, slow skeletal muscle.
  
 
0.762
UY3_17157
Alpha-actinin-3.
   
 0.755
UY3_18686
Tropomyosin alpha-1 chain; Belongs to the tropomyosin family.
   
 0.732
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.