STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_14945Cingulin. (1267 aa)    
Predicted Functional Partners:
UY3_03841
Tight junction protein ZO-1; Belongs to the MAGUK family.
   
 0.848
TJP3
Tight junction protein ZO-2.
   
 0.772
TJP2
Tight junction protein ZO-2.
   
 0.665
UY3_18703
Rho guanine nucleotide exchange factor 18.
     
 0.638
AFDN
Afadin.
      
 0.582
UY3_11532
Rho guanine nucleotide exchange factor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family.
     
 0.577
RACGAP1
Rac GTPase-activating protein 1.
     
 0.503
DMWD
Symplekin.
      
 0.478
ASH1L
Putative histone-lysine N-methyltransferase ASH1L.
      
 0.445
UY3_04482
Pleckstrin like proteiny domain-containing family A member 7.
   
 0.444
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.