STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_11494Rho guanine nucleotide exchange factor 4. (468 aa)    
Predicted Functional Partners:
UY3_07426
Uncharacterized protein.
 
    
 0.895
CDC42
Cell division control protein 42 like protein.
    
 0.771
APC2
Adenomatous polyposis coli protein 2.
   
 
 0.619
UY3_18785
Adenomatous polyposis coli protein 2.
   
 
 0.619
APC
Adenomatous polyposis coli protein.
   
 
 0.619
GABRA2
Gamma-aminobutyric acid receptor subunit alpha-2; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 
 0.588
UY3_08606
Intersectin-2.
    
0.526
UY3_10600
Intersectin-1.
    
0.520
UY3_07109
Lengsin; Belongs to the glutamine synthetase family.
   
  
 0.487
GNB1
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.
    
 
 0.483
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.