STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_11504Glypican-3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (134 aa)    
Predicted Functional Partners:
UY3_11345
Protein notum like protein.
    
 0.549
UY3_10419
Protein notum like protein.
    
 0.549
DHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.530
SHH
Sonic hedgehog protein.
    
 0.530
UY3_01037
Netrin receptor UNC5D.
    
   0.529
HS2ST1
Heparan sulfate 2-O-sulfotransferase 1.
     
 0.515
UY3_06482
Decorin; May affect the rate of fibrils formation.
    
 0.486
EXT2
Exostosin-2; Belongs to the glycosyltransferase 47 family.
     
 0.469
SDC3
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.449
UY3_11554
Neurocan core protein.
     
 0.440
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.