STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_089905-aminolevulinate synthase. (587 aa)    
Predicted Functional Partners:
UY3_00579
Uroporphyrinogen-III synthase.
      
 0.846
UY3_11465
Delta-aminolevulinic acid dehydratase.
    
 0.803
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
  
 0.789
CPOX
Coproporphyrinogen-III oxidase.
     
 0.781
UY3_18285
Sorbitol dehydrogenase.
  
 
 0.700
AGPAT2
1-acyl-sn-glycerol-3-phosphate acyltransferase beta.
   
 
 0.649
PPOX
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
     
 0.643
OXSM
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.594
LSS
Lanosterol synthase; Belongs to the terpene cyclase/mutase family.
      
 0.585
ACO2
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
    
 
 0.582
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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