STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTSACarboxypeptidase; Belongs to the peptidase S10 family. (424 aa)    
Predicted Functional Partners:
UY3_17432
Beta-galactosidase.
   
 0.915
UY3_14272
Sialidase-4.
    
 0.703
UY3_19053
Endoplasmic reticulum lectin 1.
   
 
 0.697
UY3_15123
Phosphatidylethanolamine-binding protein 4.
   
 
 0.666
GLB1L2
Beta-galactosidase-1-like protein 2; Belongs to the glycosyl hydrolase 35 family.
   
 0.665
BOD1L1
Biorientation of chromosomes in cell division protein 1-like protein.
   
 0.665
NUDT21
E3 ubiquitin-protein ligase AMFR.
    
 
 0.664
UY3_15823
Uncharacterized protein.
   
 0.621
CTSB
Cathepsin B; Belongs to the peptidase C1 family.
   
 0.582
SIAE
Sialate O-acetylesterase.
      
 0.560
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.