STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_14572DNA repair and recombination protein RAD54B. (470 aa)    
Predicted Functional Partners:
UY3_13565
Fanconi anemia group M protein.
   
 0.771
UY3_09899
Werner syndrome ATP-dependent helicase.
  
 
 0.700
UY3_14023
DNA repair protein RAD51 like protein 4.
  
 
 0.633
MUS81
Crossover junction endonuclease MUS81.
   
 0.632
UY3_03379
F-box only protein 18.
   
 
 0.631
RAD51B
DNA repair protein RAD51 like protein 2.
  
 
 0.616
UY3_01764
DNA repair protein RAD51 like protein 2.
  
 
 0.596
UY3_17553
DNA repair protein RAD52 like protein.
    
 
 0.589
UY3_05023
DNA repair protein RAD51 like protein 3.
  
 
 0.585
UY3_06783
Bloom syndrome protein like protein.
  
 
 0.576
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.