STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_08599ATPase family AAA domain-containing protein 2B. (1435 aa)    
Predicted Functional Partners:
PSMD6
26S proteasome non-ATPase regulatory subunit 6.
   
 0.793
UBLCP1
Ubiquitin-like domain-containing CTD phosphatase 1.
   
 0.792
UY3_01330
26S proteasome non-ATPase regulatory subunit 11.
   
 0.775
UY3_02574
26S proteasome non-ATPase regulatory subunit 12.
   
 0.775
PSMD2
26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.
   
 0.773
PSMD13
26S proteasome non-ATPase regulatory subunit 13.
   
 0.767
PIP5K1A
26S proteasome non-ATPase regulatory subunit 4.
   
 0.763
GPD2
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.737
UY3_01880
Proteasome subunit beta type-9.
   
 0.727
UY3_14946
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.704
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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