STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Centrin-2Centrin-2. (174 aa)    
Predicted Functional Partners:
UY3_07215
DNA repair protein complementing XP-C cells.
    
 0.894
UY3_06995
Ubiquitin-conjugating enzyme E2 variant 1.
   
 
 0.870
UY3_15918
80 kDa MCM3-associated protein.
    
 
 0.768
UY3_10856
PCI domain-containing protein 2.
    
 
 0.733
CASK
Peripheral plasma membrane protein CASK.
    
 0.733
UY3_05560
UV excision repair protein RAD23 like protein A.
   
 0.687
UY3_05255
UV excision repair protein RAD23 like protein B.
   
 0.687
NME8
Thioredoxin domain-containing protein 3.
   
 
 0.685
UY3_08710
Protein SFI1 like protein.
    
 
 0.666
UY3_07682
Protein SFI1 like protein.
    
 
 0.666
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.