STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_17993Pleiotropic regulator 1. (444 aa)    
Predicted Functional Partners:
PRPF19
Pre-mRNA-processing factor 19.
   
0.994
CDC5L
Cell division cycle 5-like protein.
   
 0.994
UY3_06671
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
   
 0.993
UY3_17883
Beta-catenin-like protein 1.
   
 0.982
CRNKL1
Crooked neck-like protein 1.
   
 
 0.956
SNW1
SNW domain-containing protein 1.
   
 
 0.955
BUD31
Protein BUD31 like protein.
   
 
 0.953
EBI3
Coiled-coil domain-containing protein 94.
    
 
 0.951
XAB2
Pre-mRNA-splicing factor SYF1.
   
 
 0.943
EFTUD2
Tr-type G domain-containing protein.
   
 
 0.943
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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