STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_10578Double-stranded RNA-binding protein Staufen like protein 2. (579 aa)    
Predicted Functional Partners:
DICER1
Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily.
    
 0.876
UY3_13633
Ribonuclease 3.
    
 0.794
UEVLD
Ubiquitin-conjugating enzyme E2 variant 3.
   
 
 0.729
AGO1
Protein argonaute-1; Belongs to the argonaute family.
    
 0.681
UY3_05773
Protein argonaute-2.
    
 0.660
UY3_01000
Protein argonaute-2.
    
 0.660
UY3_18726
Regulator of nonsense transcripts 1.
    
 
 0.659
UY3_16079
G protein gamma domain-containing protein.
      
 0.489
PCCB
Propionyl-CoA carboxylase beta chain.
      
 0.436
SKAP1
Src kinase-associated phosphoprotein 1.
      
 0.424
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.