STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_10452Ribonucleoprotein PTB-binding 2. (537 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.562
UY3_11253
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.562
UY3_12399
Heterogeneous nuclear ribonucleoprotein K.
   
 0.553
UY3_11682
Bifunctional aminoacyl-tRNA synthetase.
   
 
 0.510
RPS6
40S ribosomal protein S6.
   
   0.436
PTBP1
Polypyrimidine tract-binding protein 1.
   
 0.430
MRPL4
39S ribosomal protein L4.
   
 
 0.425
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D-like protein.
    
 0.420
UY3_15831
DNA-directed RNA polymerase II subunit RPB9.
   
 
  0.417
UY3_13380
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
  0.410
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
Server load: low (28%) [HD]