STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_13827Phospholipase. (1129 aa)    
Predicted Functional Partners:
UY3_17706
Dedicator of cytokinesis protein 4; Belongs to the DOCK family.
   
 
 0.596
PSPH
Phosphoserine phosphatase.
    
 0.584
ISCU
Iron-sulfur cluster assembly enzyme ISCU.
   
 
 0.538
PISD
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.
   
 0.531
UY3_16452
Phosphatidylserine decarboxylase proenzyme.
   
 0.530
TFRC
Transferrin receptor protein 1.
    
 0.504
RHOB
Rho-related GTP-binding protein RhoB.
    
 0.494
UY3_08880
Transforming protein RhoA.
    
 0.494
RHOG
Rho-related GTP-binding protein RhoG.
    
 0.487
RHOC
Rho-related GTP-binding protein RhoC.
    
 0.487
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.