STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB12Ankyrin repeat and SOCS box protein 12. (297 aa)    
Predicted Functional Partners:
UY3_16606
Ankyrin repeat and SOCS box protein 10.
  
 
 0.646
COMMD8
COMM domain-containing protein 8.
   
  0.596
ASB6
Ankyrin repeat and SOCS box protein 6.
  
  
 0.592
UY3_12687
COMM domain-containing protein 4.
    
 0.591
ASB2
Ankyrin repeat and SOCS box protein 2.
  
 
0.584
UY3_09561
COMM domain-containing protein 7.
    
  0.579
COMMD6
COMM domain-containing protein 6.
    
  0.579
COMMD2
COMM domain-containing protein 2.
    
  0.579
COMMD9
COMM domain-containing protein 9.
    
  0.579
UY3_06930
Cullin-5; Belongs to the cullin family.
    
 0.564
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.