STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_17045Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (402 aa)    
Predicted Functional Partners:
UY3_18991
Cytochrome c1, heme protein.
   
 
 0.704
UY3_18297
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 
 0.669
MRPL35
39S ribosomal protein L35.
   
  
 0.583
UY3_09404
NADH dehydrogenase [ubiquinone] flavoprotein 2.
   
  
 0.568
UY3_19176
Protoheme IX farnesyltransferase.
   
  
 0.558
UY3_19177
Protoheme IX farnesyltransferase.
   
  
 0.558
UY3_06932
Protein NPAT.
    
 
 0.518
REXO4
RNA exonuclease 4.
      
 0.513
TTC19
Tetratricopeptide repeat protein 19.
   
  
 0.491
PMPCB
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.
   
  
 0.490
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.