STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_07792Protocadherin-17. (205 aa)    
Predicted Functional Partners:
PCDH17
Protocadherin-17.
 
     0.945
PCDH19
Protocadherin-19.
 
      0.894
UY3_07506
Protocadherin gamma-A2.
 
  
   0.753
PCDH8
Protocadherin-8.
 
    
 0.718
PCDH12
Protocadherin-12.
 
 
   0.658
UY3_07479
Protocadherin alpha-6.
 
      0.631
PCDH1
Protocadherin-1.
 
    
 0.604
UY3_07502
Protocadherin gamma-B5.
 
  
   0.580
PCDHA8
Protocadherin alpha-8.
 
  
   0.526
UY3_07489
Protocadherin alpha-2.
 
  
   0.522
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.