STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_06673Piwi-like protein 4. (453 aa)    
Predicted Functional Partners:
TDRD15
Tudor domain-containing protein 6.
   
 0.812
UY3_03755
Tudor domain-containing protein 1.
   
 0.812
UY3_14939
Tudor and KH domain-containing protein.
   
 0.726
UY3_09986
Putative ATP-dependent RNA helicase TDRD9.
   
 0.704
UY3_08320
Tudor domain-containing protein 5.
   
 0.643
UY3_06427
RING finger protein 17.
   
 0.643
UY3_05274
Tudor domain-containing protein 7.
   
 0.618
UY3_01379
Putative ATP-dependent RNA helicase DDX4.
   
 0.616
UY3_04266
Putative helicase Mov10l1.
   
 0.567
MOV10
Putative helicase MOV-10.
   
 0.567
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.