STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM15BPutative RNA-binding protein 15B. (862 aa)    
Predicted Functional Partners:
YTHDF1
YTH domain family protein 1.
   
  
 0.690
YTHDF2
YTH domain family protein 2.
      
 0.651
UY3_12560
Pre-mRNA-splicing regulator WTAP.
    
 
 0.595
UY3_06067
Zinc finger CCCH domain-containing protein 13.
   
 
 0.591
METTL3
N6-adenosine-methyltransferase 70 kDa subunit; Belongs to the MT-A70-like family.
    
 
 0.533
UY3_14573
Protein virilizer like protein.
    
 
 0.509
UY3_01954
Methyltransferase-like protein 14; Belongs to the MT-A70-like family.
    
 
 0.506
THOC2
THO complex subunit 2.
   
 
 0.465
UY3_05422
Suppressor of hairless protein like protein.
    
 
 0.448
YTHDC2
Putative ATP-dependent RNA helicase YTHDC2.
    
 
 0.440
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.