STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM173Uncharacterized protein. (238 aa)    
Predicted Functional Partners:
IKBKE
Inhibitor of nuclear factor kappa-B kinase subunit epsilon.
   
 0.989
UY3_12567
Serine/threonine-protein kinase TBK1.
   
 0.896
UY3_14040
CARD_2 domain-containing protein.
    
 
 0.826
IKBKB
Inhibitor of nuclear factor kappa-B kinase subunit beta.
   
 0.780
UY3_04865
Inhibitor of nuclear factor kappa-B kinase subunit alpha.
   
 0.780
TRIM32
E3 ubiquitin-protein ligase TRIM32.
    
 0.671
UY3_08663
E3 ubiquitin-protein ligase TRIM56.
    
 0.657
CSF3R
Granulocyte colony-stimulating factor receptor.
   
  
 0.630
UBB
Polyubiquitin-C.
   
 0.599
MB21D1
Protein MB21D1.
  
 
 0.593
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.