STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_12299Matrix metalloproteinase-14. (522 aa)    
Predicted Functional Partners:
TIMP2
Metalloproteinase inhibitor 2.
   
 0.968
TIMP3
Metalloproteinase inhibitor 3.
   
 0.764
UY3_04723
Collagenase 3.
  
0.666
RDX
Radixin.
    
 0.659
UY3_03900
Metalloproteinase inhibitor 4.
    
 0.657
MMP2
72 kDa type IV collagenase.
  
0.626
UY3_06482
Decorin; May affect the rate of fibrils formation.
    
 0.618
UY3_02702
CD44 antigen.
   
 0.604
UY3_04724
Matrix metalloproteinase-27.
  
0.550
MMP9
Matrix metalloproteinase-9.
   
 
0.516
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.