STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRFReceptor-type tyrosine-protein phosphatase F. (2831 aa)    
Predicted Functional Partners:
IRS1
Insulin receptor substrate 1.
    
  0.907
CTNNB1
Catenin beta-1.
   
 0.906
INSR
Myosin-IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
  0.900
GRB2
Growth factor receptor-bound protein 2.
   
 0.635
UY3_05170
Interleukin-1 receptor accessory protein.
    
 0.614
PTPRD
Receptor-type tyrosine-protein phosphatase delta.
 
      0.600
IL1RAPL1
Interleukin-1 receptor accessory protein-like 1.
    
 0.551
UY3_08673
Receptor-type tyrosine-protein phosphatase F.
 
      0.547
SHROOM3
Protein Shroom3.
   
 
 0.531
TJP2
Tight junction protein ZO-2.
   
  
 0.531
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.