STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTCRAProtein canopy like protein 3. (337 aa)    
Predicted Functional Partners:
UNC93B1
Protein unc-93 like protein B1.
   
 
 0.671
UY3_10477
Leucine-rich repeat-containing protein 40.
    
 0.601
UY3_08989
Toll-like receptor 9.
    
 0.524
TLR7
Toll-like receptor 7; Belongs to the Toll-like receptor family.
    
 0.509
UY3_07467
Toll-like receptor 8; Belongs to the Toll-like receptor family.
    
 0.509
UY3_07466
Toll-like receptor 8.
    
 0.509
SLX4
Heat shock protein 75 kDa.
    
 0.508
HSP90AB1
Heat shock cognate protein HSP 90-beta.
    
 0.508
HSP90AA1
Heat shock protein HSP 90-alpha.
    
 0.508
UY3_08230
Hamartin.
    
 0.508
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.