STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD4Chromodomain-helicase-DNA-binding protein 4. (2388 aa)    
Predicted Functional Partners:
ADNP
Activity-dependent neuroprotector homeobox protein.
   
 
 0.800
RBBP7
Histone-binding protein RBBP7.
   
 0.785
RBBP4
Histone-binding protein RBBP4.
   
 0.785
UY3_18745
Transcriptional repressor p66-alpha.
   
 0.781
GATAD2B
Transcriptional repressor p66-beta.
   
 0.774
MBD3
Methyl-CpG-binding domain protein 3.
    
 0.749
UY3_02770
Methyl-CpG-binding domain protein 2.
    
 0.749
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.719
UY3_15454
Metastasis-associated protein MTA3.
   
 0.712
UY3_08393
Metastasis-associated protein MTA1.
   
 0.712
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.