STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB11ARas-related protein Rab-11A. (203 aa)    
Predicted Functional Partners:
UY3_02354
Rab11 family-interacting protein 5.
    
 0.951
UY3_11542
Ras-related protein Rab-11A.
  
  
 
0.901
RAB11B
Ras-related protein Rab-11B.
  
  
 
0.900
RAB3IL1
Guanine nucleotide exchange factor for Rab-3A.
    
 0.892
UY3_03787
Myosin-Va; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.866
UY3_08606
Intersectin-2.
    
 0.849
GDI2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.825
PI4KB
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
    
 0.806
UY3_11198
Rab11 family-interacting protein 2.
   
 0.789
UY3_11919
Rab11 family-interacting protein 2.
   
 0.789
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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