STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_11864Leucine-rich repeat-containing protein C10orf11 like protein. (182 aa)    
Predicted Functional Partners:
PHF5A
PHD finger-like domain-containing protein 5A.
   
 0.987
CAMLG
Putative ATP-dependent RNA helicase DDX46.
    
 0.984
UY3_15847
Small nuclear ribonucleoprotein Sm D2.
   
 0.981
SF3B1
Splicing factor 3B subunit 1.
   
 0.978
SF3B3
Splicing factor 3B subunit 3.
    
 0.978
UY3_14609
Small nuclear ribonucleoprotein-associated protein N.
   
 0.977
SNRPG
Small nuclear ribonucleoprotein G.
   
 0.972
SF3A1
Splicing factor 3A subunit 1.
   
 0.972
SF3B2
Splicing factor 3B subunit 2.
   
 0.972
LSM10
U7 snRNA-associated Sm-like protein LSm10.
   
 0.971
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.