STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH16Cadherin-16. (1030 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1.
    
 0.670
JUP
Junction plakoglobin.
    
 0.595
CTNND1
Catenin delta-1.
    
 0.594
UY3_02448
Armadillo repeat protein deleted in velo-cardio-facial syndrome like protein.
    
 0.594
PCCA
Propionyl-CoA carboxylase alpha chain.
      
 0.591
SLC6A18
Sodium-dependent neutral amino acid transporter B(0)AT3.
   
  
 0.576
CTNND2
Catenin delta-2.
    
 0.500
UY3_04058
Plakophilin-4.
    
 0.500
CDH5
Cadherin-5; Cadherins are calcium-dependent cell adhesion proteins.
     
0.491
UY3_08621
Catenin alpha-2.
    
 0.468
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.