STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_15697L-threonine 3-dehydrogenase. (348 aa)    
Predicted Functional Partners:
UY3_10400
Beta_elim_lyase domain-containing protein.
    
 0.927
SDSL
Serine dehydratase-like protein.
   
 
 0.918
SDS
L-serine dehydratase/L-threonine deaminase.
   
 
 0.918
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.866
UY3_11253
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.866
MRPS5
28S ribosomal protein S5.
   
 0.739
RPS8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.734
RPS25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.731
UY3_03653
40S ribosomal protein S4.
   
 0.730
UY3_15885
2-amino-3-ketobutyrate coenzyme A ligase.
  
 
 0.729
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.