STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_05858Insulin-like growth factor-binding protein 6. (137 aa)    
Predicted Functional Partners:
UY3_10025
Insulin-like growth factor II.
   
 0.660
UY3_10888
Centromere protein I.
      
 0.599
SCG2
Secretogranin-2.
      
 0.589
IGFALS
Insulin-like growth factor-binding protein complex acid labile subunit.
   
 0.443
TRIP13
Pachytene checkpoint protein 2 like protein; Belongs to the AAA ATPase family.
      
 0.425
FAM188B
Aquaporin-1; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.422
CENPF
Centromere protein F.
      
 0.413
UY3_08995
Aquaporin FA-CHIP; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.408
MAD2L1BP
MAD2L1-binding protein.
      
 0.405
CRABP1
Cellular retinoic acid-binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.404
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.