STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDNFCerebral dopamine neurotrophic factor. (116 aa)    
Predicted Functional Partners:
ANKRD45
Ankyrin repeat domain-containing protein 45.
   
 
 0.785
HSPA5
78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 
 0.785
SOD3
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
     
 0.583
UY3_05731
X-box-binding protein 1.
   
  
 0.567
LRRC30
Leucine-rich repeat-containing protein 30.
   
    0.513
BDNF
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
      
 0.480
UY3_12601
Glial cell line-derived neurotrophic factor.
      
 0.477
UY3_07269
Huntingtin.
      
 0.458
UY3_09476
Hypoxia up-regulated protein 1.
   
 
 0.453
UY3_05637
Histone-lysine N-methyltransferase SETD1B.
      
 0.453
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.