Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKT2 | PDPK1 | M7B852 | M7B2T1 | Non-specific serine/threonine protein kinase. | 3-phosphoinositide-dependent protein kinase 1. | 0.985 |
AKT2 | PIK3R1 | M7B852 | M7BH49 | Non-specific serine/threonine protein kinase. | Phosphatidylinositol 3-kinase regulatory subunit alpha. | 0.941 |
AKT2 | SRC | M7B852 | M7BRB1 | Non-specific serine/threonine protein kinase. | Tyrosine-protein kinase. | 0.503 |
ERBB2 | HRAS | M7B7D1 | M7BSD6 | Receptor protein-tyrosine kinase. | GTPase HRas. | 0.753 |
ERBB2 | IGF1R | M7B7D1 | M7BWV0 | Receptor protein-tyrosine kinase. | Tyrosine-protein kinase receptor. | 0.932 |
ERBB2 | KRAS | M7B7D1 | M7AKS0 | Receptor protein-tyrosine kinase. | GTPase KRas. | 0.753 |
ERBB2 | PIK3R1 | M7B7D1 | M7BH49 | Receptor protein-tyrosine kinase. | Phosphatidylinositol 3-kinase regulatory subunit alpha. | 0.955 |
ERBB2 | SRC | M7B7D1 | M7BRB1 | Receptor protein-tyrosine kinase. | Tyrosine-protein kinase. | 0.678 |
ERBB2 | VAV1 | M7B7D1 | M7ANH6 | Receptor protein-tyrosine kinase. | Proto-oncogene vav. | 0.552 |
HRAS | ERBB2 | M7BSD6 | M7B7D1 | GTPase HRas. | Receptor protein-tyrosine kinase. | 0.753 |
HRAS | KRAS | M7BSD6 | M7AKS0 | GTPase HRas. | GTPase KRas. | 0.901 |
HRAS | PDPK1 | M7BSD6 | M7B2T1 | GTPase HRas. | 3-phosphoinositide-dependent protein kinase 1. | 0.603 |
HRAS | PIK3R1 | M7BSD6 | M7BH49 | GTPase HRas. | Phosphatidylinositol 3-kinase regulatory subunit alpha. | 0.950 |
HRAS | SRC | M7BSD6 | M7BRB1 | GTPase HRas. | Tyrosine-protein kinase. | 0.566 |
IGF1R | ERBB2 | M7BWV0 | M7B7D1 | Tyrosine-protein kinase receptor. | Receptor protein-tyrosine kinase. | 0.932 |
IGF1R | IRS1 | M7BWV0 | M7BWZ3 | Tyrosine-protein kinase receptor. | Insulin receptor substrate 1. | 0.977 |
IGF1R | PDPK1 | M7BWV0 | M7B2T1 | Tyrosine-protein kinase receptor. | 3-phosphoinositide-dependent protein kinase 1. | 0.414 |
IGF1R | PIK3R1 | M7BWV0 | M7BH49 | Tyrosine-protein kinase receptor. | Phosphatidylinositol 3-kinase regulatory subunit alpha. | 0.943 |
INPPL1 | PIK3R1 | M7ARM7 | M7BH49 | Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2. | Phosphatidylinositol 3-kinase regulatory subunit alpha. | 0.937 |
INPPL1 | SRC | M7ARM7 | M7BRB1 | Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2. | Tyrosine-protein kinase. | 0.549 |
page 1 of 3