STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_15139AFG3-like protein 2. (109 aa)    
Predicted Functional Partners:
AFG3L2
AFG3-like protein 2.
 
     0.939
PHB
Prohibitin.
   
 0.825
UY3_16437
Prohibitin-2.
   
 0.802
UY3_06607
Paraplegin.
  
 
0.706
YJEFN3
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13.
   
 
 0.649
UY3_07141
Stomatin-like protein 1.
  
 0.646
UY3_08200
Mitochondrial-processing peptidase subunit alpha.
  
 0.639
UY3_00848
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.639
CLPX
ATP-dependent Clp protease ATP-binding subunit clpX-like protein.
  
  
 0.625
MRPL13
39S ribosomal protein L13.
  
 
 0.619
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.