STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_15119Vinexin. (651 aa)    
Predicted Functional Partners:
UY3_04869
Vinculin.
   
 0.830
UY3_00325
Integrin alpha-1; Belongs to the integrin alpha chain family.
     
 0.630
UY3_04461
Integrin beta; Belongs to the integrin beta chain family.
     
 0.589
UY3_09847
GTP cyclohydrolase 1.
    
   0.559
UY3_09754
GTP cyclohydrolase 1.
    
   0.559
GAK
Cyclin-G-associated kinase.
     
 0.542
LPXN
Leupaxin.
    
 0.536
UY3_08692
Paxillin.
    
 0.536
UY3_18033
Talin-1.
   
 
 0.495
UY3_12571
Talin-2.
   
 
 0.495
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.