STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_07363NKAP-like protein. (392 aa)    
Predicted Functional Partners:
UY3_04641
Pre-mRNA-splicing factor SLU7.
   
 0.931
PRKRIP1
PRKR-interacting protein 1 like protein.
   
 0.862
UY3_18471
UPF0667 protein C1orf55.
    
 0.858
DHX8
ATP-dependent RNA helicase DHX8.
   
 0.804
PPIL1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.787
UY3_16559
Pre-mRNA-splicing factor CWC22 like protein.
   
  0.787
UY3_14864
Pre-mRNA-splicing factor syf2.
    
  0.787
CDC40
Pre-mRNA-processing factor 17.
   
  0.787
DDX41
Putative ATP-dependent RNA helicase DDX41.
    
  0.779
UY3_16560
Pre-mRNA-splicing factor CWC22 like protein.
   
  0.764
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.