STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_14678Mothers against decapentaplegic homolog. (178 aa)    
Predicted Functional Partners:
SMAD2
Mothers against decapentaplegic like protein 2.
 
0.979
SKI
Ski oncogene.
    
 0.921
SMAD9
Mothers against decapentaplegic like protein 9.
 
0.919
MMAA
Mothers against decapentaplegic homolog.
   
0.912
UY3_00025
Mothers against decapentaplegic like protein 3.
  
 0.841
BMP2
Bone morphogenetic protein 2.
    
 0.832
SMAD5
Mothers against decapentaplegic homolog.
   
0.823
SMAD3
Mothers against decapentaplegic homolog.
 
0.804
BMPR2
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
   
 0.752
SP1
Transcription factor Sp1.
   
 0.731
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.