STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKDREJPolycystic kidney disease and receptor for egg jelly-related protein. (2654 aa)    
Predicted Functional Partners:
PKD2L1
Polycystic kidney disease 2-like 1 protein.
    
0.736
PKD2
Polycystin-2.
    
0.650
UY3_14662
Exocyst complex component 5.
     
 0.508
NUDT9
ADP-ribose pyrophosphatase.
      
 0.501
UY3_08556
Acrosin-binding protein.
      
 0.482
DHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 
 0.469
CKAP5
Cytoskeleton-associated protein 5.
      
 0.462
SEC63
Translocation protein SEC63 like protein.
    
 
 0.448
SPERT
Spermatid-associated protein.
    
 
 0.435
RHOV
Rho-related GTP-binding protein RhoV.
     
 0.423
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.