STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMPD2Sphingomyelin phosphodiesterase 2. (436 aa)    
Predicted Functional Partners:
UGCG
Ceramide glucosyltransferase.
     
 0.957
SMPD4
Sphingomyelin phosphodiesterase 4.
     
 0.949
SGMS1
Phosphatidylcholine:ceramide cholinephosphotransferase 1.
     
 0.942
SGMS2
Phosphatidylcholine:ceramide cholinephosphotransferase 2.
     
 0.942
CERS2
LAG1 longevity assurance like protein 2.
     
 0.934
DEGS1
Sphingolipid delta(4)-desaturase DES1.
     
 0.931
DEGS2
Sphingolipid delta(4)-desaturase/C4-hydroxylase DES2.
     
 0.931
UY3_15832
Sphingolipid delta(4)-desaturase/C4-hydroxylase DES2.
     
 0.931
CERS6
LAG1 longevity assurance like protein 6.
     
 0.931
SGPP1
Sphingosine-1-phosphate phosphatase 1.
    
 0.924
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.