STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_05158Receptor-transporting protein 3. (219 aa)    
Predicted Functional Partners:
UY3_17577
Ubl carboxyl-terminal hydrolase 18.
   
  
 0.584
UY3_15306
Uncharacterized protein.
   
  
 0.549
DHX58
Putative ATP-dependent RNA helicase DHX58.
   
  
 0.522
UY3_03467
Uncharacterized protein.
   
    0.505
REEP2
Receptor expression-enhancing protein.
     
 0.499
SPATS2L
SPATS2-like protein.
      
 0.478
RSAD2
Radical S-adenosyl methionine domain-containing protein 2.
   
  
 0.473
UY3_04040
Interferon-induced helicase C domain-containing protein 1; Belongs to the peptidase S9B family.
   
  
 0.457
UY3_08113
Interferon regulatory factor 3.
   
  
 0.431
UY3_08114
Interferon regulatory factor 3.
   
  
 0.431
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.