STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MANSC4MANSC domain-containing protein 4. (347 aa)    
Predicted Functional Partners:
DDX28
Putative ATP-dependent RNA helicase DDX28.
      
 0.725
OSGIN1
Oxidative stress-induced growth inhibitor 1.
    
 
 0.622
DUSP16
Dual specificity protein phosphatase 16.
    
 
 0.604
GAK
Cyclin-G-associated kinase.
   
 
 0.596
CAP1
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 
 0.560
CAP2
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 
 0.560
UY3_14587
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 0.540
UY3_14153
Ribosome biogenesis protein BMS1 like protein.
      
 0.479
UY3_05591
Tetratricopeptide repeat protein 38.
      
 0.478
MECOM
MDS1 and EVI1 complex locus protein EVI1.
      
 0.477
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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