STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSUN3Putative methyltransferase NSUN3; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (331 aa)    
Predicted Functional Partners:
UY3_14258
mTERF domain-containing protein 2.
    
 0.883
UY3_17002
Nucleolar complex protein 2 like protein.
   
 
 0.793
UY3_11067
Ribosome biogenesis protein BRX1 like protein.
   
 
 0.775
UY3_01636
Nucleolar GTP-binding protein 1.
   
 
 0.765
UY3_13716
Uncharacterized protein.
   
 
 0.742
NOC3L
Nucleolar complex protein 3 like protein.
   
 
 0.729
UY3_18619
MKI67 FHA domain-interacting nucleolar phosphoprotein-like protein.
   
 
 0.725
PUM3
PUM-HD domain-containing protein.
   
 
 0.708
NSA2
Ribosome biogenesis protein NSA2 like protein.
   
 
 0.708
WDR12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.698
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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