STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MKLN1Muskelin. (435 aa)    
Predicted Functional Partners:
SEC63
Translocation protein SEC63 like protein.
      
 0.851
UY3_10681
Protein RMD5 like protein A.
    
 
 0.778
GID8
Protein C20orf11 like protein.
    
 
 0.762
RMND5B
Protein RMD5 like protein B.
    
 
 0.690
UY3_18480
WD repeat-containing protein 26.
   
 
 0.682
UY3_00111
Armadillo repeat-containing protein 8.
   
 
 0.672
RANBP10
Ran-binding protein 10.
    
 
 0.668
UY3_02392
Ran-binding protein 9.
    
 
 0.668
UY3_05859
SPRY domain-containing protein 3.
    
 
 0.561
UY3_02495
Putative E3 ubiquitin-protein ligase TRIP12.
   
    0.516
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.