STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSBLupus La protein. (400 aa)    
Predicted Functional Partners:
TROVE2
60 kDa SS-A/Ro ribonucleoprotein.
    
 
 0.702
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1.
   
 
 0.660
ZC3H15
Zinc finger CCCH domain-containing protein 15.
   
    0.615
UY3_18130
Heterogeneous nuclear ribonucleoprotein C-like 1.
   
 
 0.586
UY3_15847
Small nuclear ribonucleoprotein Sm D2.
   
 
 0.582
UY3_17473
T-complex protein 1 subunit theta.
   
  
 0.559
SRSF7
Serine/arginine-rich splicing factor 7.
   
  
 0.554
UY3_02211
U1 small nuclear ribonucleoprotein 70 kDa.
   
 
 0.548
NCL
Nucleolin.
   
 
 0.535
ILF2
Interleukin enhancer-binding factor 2.
   
  
 0.521
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.